Our first spatial transcriptomics sample is here! FFPE mouse breast cancer with a 300 genes custom panel. #Merscope

Great work from Rahul Satija lab in New York Genome Center! Comparison of 6 spatial genomics platforms, with MERSCOPE having the best performance, 2X more sensitive than Xenium, and much higher specificity. biorxiv.org/content/10.110…

Exciting new beginings 🎉 Vizgen Weizmann Institute
#Merscope #Vizgen #SpatialBiology #lovemyjob

Which of the different spatial transcriptomics (ST) technologies should you use for your research? The lessons we have learnt from comparing RNAscope, Molecular Cartography (MC), Merscope, Xenium and Visium are now on bioRxiv doi.org/10.1101/2024.0… 🧵

Today, we learned about #MERSCOPE Platform, which enables genome-scale nucleic acid imaging with high accuracy at subcellular resolution, from Dr. Mickael Ploquin (Vizgen and Bucher AG). If you are interested in this technology, please contact us

fgcz-intranet.uzh.ch/tiki-index.php…

🎙️Have you listened to the latest episode of The Single-Cell World podcast?
🎧 Tune in now to hear my engaging conversation with Dr. Jiang He Jiang He. He shares insights on Vizgen MERSCOPE® spatial transcriptomics technology. 😉
🔗 singlecellworld.podbean.com/e/ep37/

💻Missed the #Primetech & Vizgen Live Webinar? Watch It On-Demand! 🇯🇵

Explore the #MERSCOPE 1000-plex fully custom gene panel & advanced #CellSegmentation methods using #Cellpose2 .

🔗 hubs.ly/Q02wYfP60

#MERSCOPE #CellSegmentation #MachineLearning #JapaneseWebinar

💻 Check out our comprehensive webinar playlist on YouTube where experts explain how they leverage the #MERSCOPE Platform to address some of the most challenging questions in biology today.

🔗 hubs.ly/Q02wTz_J0

#SpatialGenomics #Vizgen #WebinarSeries #BiologicalDiscovery

We are excited 😍🤩 that our brand new #singlecell #spatial #transcriptomic platforms have begun to arrive! SingleCellCore_HMS’s expansion to spatial #multiomics is starting to feel real. Today we unpacked #Vizgen #Merscope ! 🥳🥳🥳

On March 27, join us for a seminar with Mickael Ploquin, unveiling the potential of #MERSCOPE by Vizgen !

Discover tissue organization secrets at Functional Genomics Center Zurich, Irchel Campus. Don't miss this exclusive event!

Register here:
ema.uzh.ch/en/register/fu…

Looking for info on how commercially available #spatialimaging platforms compare? Researchers at the Broad Institute independently conducted a head-to-head study of #Xenium , CosMx, and MERSCOPE data quality. Read this news release to learn more 📰: bit.ly/4akJjrj

Our lab is hosting a discussion with George Emanuel of Vizgen this Wednesday, June 7.

Join us to learn more about the MERSCOPE platform for Spatial Transcriptomics as well as its applications in neuroscience research and beyond! events.stanford.edu/event/merscope…

#spatialtranscriptomic alert 🚨
The MERSCOPE Vizgen arrived at our single cell facility @Institut_Curie (Initiative Single Cell). Many Curie’s teams are ready to play with it, with us and Kyra Borgman from Antoine Coulon.

Struggling with cell segmentation in complex tissues like multinucleated muscle or abnormally shaped cells? Enhance your #CellSegmentation with Vizgen's #Cellpose2 Plugin! Learn more about VPT and the plugin on our website- hubs.ly/Q02v04-l0
#MERSCOPE #CellSegmentation

Great #SpatialTranscriptomics workshop today ⁦⁦UC Irvine⁩ , learning more about the MERSCOPE technology ⁦Vizgen⁩, organized by ⁦Dr Xu⁩, and in preparation for the hand-on demo.

🌟 We are thrilled to share a feature article from BioTuesdays, spotlighting Vizgen's pioneering work in #SpatialGenomics .

📖 Read the full article for insights from our CEO, Terry Lo.

🔗hubs.ly/Q02wXjBc0

#Vizgen #SpatialGenomics #MERSCOPE #MERFISH

Benchmarking Imaging-based #SpatialTranscriptomics on FFPE #TissueMicroArray

7 tumors + 16 normal tissues (Difference b/w Renal & Kidney?🤔)

#CosMx 1 panel
#Xenium 3 panels
#MERSCOPE 2 panels
>94 genes overlap b/w panels

'CosMx transcript counts may be slightly inflated by

Comprehensive comparison of spatial tx platforms on FFPE samples presented by Human Wang involving 10x Genomics Xenium, NanoString CosMx and Vizgen MERSCOPE. #AGBT24

Last week I presented the R package MoleculeExperiment at the
#EuroBioC2023 conference in Belgium.

Main takeaway: If you are working with imaging-based spatial transcriptomics data (e.g., #Xenium #CosMx , #MERSCOPE ) check out MoleculeExperiment:
academic.oup.com/bioinformatics…

A series of Science paper on human brain cell atlas just came out this week. Excited to see at least 4 papers using MERSCOPE!